# Maintainer: gym603 <gui_yuan_miao@163.com>

_realname=biopython
pkgbase=mingw-w64-python-${_realname}
pkgname=("${MINGW_PACKAGE_PREFIX}-python-${_realname}")
provides=("${MINGW_PACKAGE_PREFIX}-python3-${_realname}")
conflicts=("${MINGW_PACKAGE_PREFIX}-python3-${_realname}")
replaces=("${MINGW_PACKAGE_PREFIX}-python3-${_realname}")
pkgver=1.79
pkgrel=1
pkgdesc="A set of freely available tools for biological computation written in Python (mingw-w64)"
arch=('any')
mingw_arch=('mingw32' 'mingw64' 'ucrt64' 'clang64')
license=('Biopython')
url="https://biopython.org/"
depends=("${MINGW_PACKAGE_PREFIX}-python"
         "${MINGW_PACKAGE_PREFIX}-python-numpy")
makedepends=("${MINGW_PACKAGE_PREFIX}-python-setuptools")
source=(${_realname}-${pkgver}.tar.gz::https://biopython.org/DIST/${_realname}-${pkgver}.tar.gz)
sha256sums=('edb07eac99d3b8abd7ba56ff4bedec9263f76dfc3c3f450e7d2e2bcdecf8559b')

prepare() {
  cd "${srcdir}"
  rm -rf "python-build-${CARCH}" | true
  cp -r "${_realname}-${pkgver}" "python-build-${CARCH}"
}

build() {
  cd "${srcdir}/python-build-${CARCH}"
  ${MINGW_PREFIX}/bin/python setup.py build
}

package() {
  cd "${srcdir}/python-build-${CARCH}"

  MSYS2_ARG_CONV_EXCL="--prefix=;--install-scripts=;--install-platlib=" \
    ${MINGW_PREFIX}/bin/python setup.py install --prefix=${MINGW_PREFIX} --root="${pkgdir}" -O1 --skip-build

  install -Dm644 LICENSE.rst "${pkgdir}${MINGW_PREFIX}/share/licenses/python-${_realname}/LICENSE.rst"
}