diff --git a/checkstyle/src/plugin-resources/checkstyle-all.jsl b/checkstyle/src/plugin-resources/checkstyle-all.jsl
index 07163c0b..c7225a30 100644
--- a/checkstyle/src/plugin-resources/checkstyle-all.jsl
+++ b/checkstyle/src/plugin-resources/checkstyle-all.jsl
@@ -26,6 +26,7 @@
   xmlns:jsl="jelly:jsl"
   xmlns:util="jelly:util"
   xmlns:x="jelly:xml"
+  xmlns:maven="jelly:maven"
   xmlns:doc="doc"
   xmlns="dummy" trim="true">
 
@@ -132,23 +133,73 @@
             </tbody>
           </table>
 
+          <!-- Where documentations are generated -->
+          <j:set var="docsDestDir" value="${maven.docs.dest}"/>
+          <util:replace var="docsDestDir" value="${docsDestDir}" oldChar="\\" newChar="/"/>
+          <!-- JXR is activated ? -->
+          <j:set var="jxrActivated" value="false"/>
+          <j:forEach var="report" items="${pom.reports}">
+            <j:if test="${report.equals('maven-jxr-plugin')}">
+              <j:set var="jxrActivated" value="true"/>
+            </j:if>
+          </j:forEach>
+          <j:if test="${pom.build.sourceDirectory != null}">
+            <!-- Where JXR files are generated for the code -->
+            <j:set var="jxrDestDir" value="${maven.jxr.destdir}"/>
+            <util:replace var="jxrDestDir" value="${jxrDestDir}" oldChar="\\" newChar="/"/>
+            <j:choose>
+              <j:when test="${jxrActivated and jxrDestDir.startsWith(docsDestDir)}">
+                <!-- We create a relative path to the jxr files -->
+                <!-- ${maven.jxr.destdir} should be a subdirectory of ${maven.docs.dest} -->
+                <j:set var="jxrDestDir" value="${jxrDestDir.substring(docsDestDir.length(),jxrDestDir.length())}"/>
+                <!-- remove first slash if needed -->
+                <j:if test="${jxrDestDir.startsWith('/')}">
+                  <j:set var="jxrDestDir" value="${jxrDestDir.substring(1,jxrDestDir.length())}"/>
+                </j:if>
+              </j:when>
+              <j:otherwise>
+                <!-- Do not generate the link -->
+                  <j:set var="jxrDestDir" value=""/>
+              </j:otherwise>
+            </j:choose>
+          </j:if>
+          <j:if test="${pom.build.unitTestSourceDirectory != null}">
+            <!-- Where JXR files are generated for the tests -->
+            <j:set var="jxrTestDestDir" value="${maven.jxr.destdir.test}"/>
+            <util:replace var="jxrTestDestDir" value="${jxrTestDestDir}" oldChar="\\" newChar="/"/>
+            <maven:get var="xrefGeneratedForTests" plugin="maven-jxr-plugin" property="maven.jxr.include.testXref"/>
+            <j:choose>
+              <j:when test="${jxrActivated and xrefGeneratedForTests and jxrTestDestDir.startsWith(docsDestDir)}">
+                <!-- We create a relative path to the jxr files for tests -->
+                <!-- ${maven.jxr.destdir.test} should be a subdirectory of ${maven.docs.dest} -->
+                <j:set var="jxrTestDestDir" value="${jxrTestDestDir.substring(docsDestDir.length(),jxrTestDestDir.length())}"/>
+                <!-- remove first slash if needed -->
+                <j:if test="${jxrTestDestDir.startsWith('/')}">
+                  <j:set var="jxrTestDestDir" value="${jxrTestDestDir.substring(1,jxrTestDestDir.length())}"/>
+                </j:if>
+              </j:when>
+              <j:otherwise>
+                <!-- Do not generate the link -->
+                  <j:set var="jxrTestDestDir" value=""/>
+              </j:otherwise>
+            </j:choose>
+          </j:if>
+
           <j:forEach var="file" items="${files}">
             <x:set var="errorCount" select="count($file/error)"/>
             <j:if test="${errorCount != 0}">
               <j:set var="name" value="${file.attribute('name').getValue()}"/>
               <j:set var="srcRelPathLen" value="${pathtool.getRelativePath(srcDir,name).length()}"/>
               <j:set var="jxrPath" value=""/>
-              <j:if test="${srcRelPathLen > 0}">
+              <j:if test="${srcRelPathLen > 0 and jxrActivated}">
                 <j:set var="name" value="${name.substring(mavenTool.toInteger(srcDirLength.toString()))}"/>
-                <!--  FIXME: this should be determined by ${maven.jxr.destdir} -->
-                <j:set var="jxrPath" value="../xref"/>
+                <j:set var="jxrPath" value="../${jxrDestDir}"/>
               </j:if>
               <j:if test="${pom.build.unitTestSourceDirectory != null}">
                 <j:set var="tstRelPathLen" value="${pathtool.getRelativePath(tstDir,name).length()}"/>
-                <j:if test="${tstRelPathLen > 0}">
+                <j:if test="${tstRelPathLen > 0 and jxrActivated}">
                   <j:set var="name" value="${name.substring(mavenTool.toInteger(tstDirLength.toString()))}"/>
-                  <!--  FIXME: this should be determined by ${maven.jxr.destdir.test} -->
-                  <j:set var="jxrPath" value="../xref-test"/>
+                  <j:set var="jxrPath" value="../${jxrTestDestDir}"/>
                 </j:if>
               </j:if>
               <util:replace var="name" value="${name}" oldChar="\\" newChar="/"/>
diff --git a/checkstyle/src/plugin-resources/checkstyle_severity_filter.jsl b/checkstyle/src/plugin-resources/checkstyle_severity_filter.jsl
index 8d678085..8b9f4c2e 100644
--- a/checkstyle/src/plugin-resources/checkstyle_severity_filter.jsl
+++ b/checkstyle/src/plugin-resources/checkstyle_severity_filter.jsl
@@ -26,6 +26,7 @@
   xmlns:jsl="jelly:jsl"
   xmlns:util="jelly:util"
   xmlns:x="jelly:xml"
+  xmlns:maven="jelly:maven"
   xmlns:doc="doc"
   xmlns="dummy" trim="true">
 
@@ -136,23 +137,73 @@
             </tbody>
           </table>
 
+          <!-- Where documentations are generated -->
+          <j:set var="docsDestDir" value="${maven.docs.dest}"/>
+          <util:replace var="docsDestDir" value="${docsDestDir}" oldChar="\\" newChar="/"/>
+          <!-- JXR is activated ? -->
+          <j:set var="jxrActivated" value="false"/>
+          <j:forEach var="report" items="${pom.reports}">
+            <j:if test="${report.equals('maven-jxr-plugin')}">
+              <j:set var="jxrActivated" value="true"/>
+            </j:if>
+          </j:forEach>
+          <j:if test="${pom.build.sourceDirectory != null}">
+            <!-- Where JXR files are generated for the code -->
+            <j:set var="jxrDestDir" value="${maven.jxr.destdir}"/>
+            <util:replace var="jxrDestDir" value="${jxrDestDir}" oldChar="\\" newChar="/"/>
+            <j:choose>
+              <j:when test="${jxrActivated and jxrDestDir.startsWith(docsDestDir)}">
+                <!-- We create a relative path to the jxr files -->
+                <!-- ${maven.jxr.destdir} should be a subdirectory of ${maven.docs.dest} -->
+                <j:set var="jxrDestDir" value="${jxrDestDir.substring(docsDestDir.length(),jxrDestDir.length())}"/>
+                <!-- remove first slash if needed -->
+                <j:if test="${jxrDestDir.startsWith('/')}">
+                  <j:set var="jxrDestDir" value="${jxrDestDir.substring(1,jxrDestDir.length())}"/>
+                </j:if>
+              </j:when>
+              <j:otherwise>
+                <!-- Do not generate the link -->
+                  <j:set var="jxrDestDir" value=""/>
+              </j:otherwise>
+            </j:choose>
+          </j:if>
+          <j:if test="${pom.build.unitTestSourceDirectory != null}">
+            <!-- Where JXR files are generated for the tests -->
+            <j:set var="jxrTestDestDir" value="${maven.jxr.destdir.test}"/>
+            <util:replace var="jxrTestDestDir" value="${jxrTestDestDir}" oldChar="\\" newChar="/"/>
+            <maven:get var="xrefGeneratedForTests" plugin="maven-jxr-plugin" property="maven.jxr.include.testXref"/>
+            <j:choose>
+              <j:when test="${jxrActivated and xrefGeneratedForTests and jxrTestDestDir.startsWith(docsDestDir)}">
+                <!-- We create a relative path to the jxr files for tests -->
+                <!-- ${maven.jxr.destdir.test} should be a subdirectory of ${maven.docs.dest} -->
+                <j:set var="jxrTestDestDir" value="${jxrTestDestDir.substring(docsDestDir.length(),jxrTestDestDir.length())}"/>
+                <!-- remove first slash if needed -->
+                <j:if test="${jxrTestDestDir.startsWith('/')}">
+                  <j:set var="jxrTestDestDir" value="${jxrTestDestDir.substring(1,jxrTestDestDir.length())}"/>
+                </j:if>
+              </j:when>
+              <j:otherwise>
+                <!-- Do not generate the link -->
+                  <j:set var="jxrTestDestDir" value=""/>
+              </j:otherwise>
+            </j:choose>
+          </j:if>
+
           <j:forEach var="file" items="${files}">
             <x:set var="errorCount" select="count($file/error[@severity=$severity])"/>
             <j:if test="${errorCount != 0}">
               <j:set var="name" value="${file.attribute('name').getValue()}"/>
               <j:set var="srcRelPathLen" value="${pathtool.getRelativePath(srcDir,name).length()}"/>
               <j:set var="jxrPath" value=""/>
-              <j:if test="${srcRelPathLen > 0}">
+              <j:if test="${srcRelPathLen > 0 and jxrActivated}">
                 <j:set var="name" value="${name.substring(mavenTool.toInteger(srcDirLength.toString()))}"/>
-                <!--  FIXME: this should be determined by ${maven.jxr.destdir} -->
-                <j:set var="jxrPath" value="../xref"/>
+                <j:set var="jxrPath" value="../${jxrDestDir}"/>
               </j:if>
               <j:if test="${pom.build.unitTestSourceDirectory != null}">
                 <j:set var="tstRelPathLen" value="${pathtool.getRelativePath(tstDir,name).length()}"/>
-                <j:if test="${tstRelPathLen > 0}">
+                <j:if test="${tstRelPathLen > 0 and jxrActivated}">
                   <j:set var="name" value="${name.substring(mavenTool.toInteger(tstDirLength.toString()))}"/>
-                  <!--  FIXME: this should be determined by ${maven.jxr.destdir.test} -->
-                  <j:set var="jxrPath" value="../xref-test"/>
+                  <j:set var="jxrPath" value="../${jxrTestDestDir}"/>
                 </j:if>
               </j:if>
               <util:replace var="name" value="${name}" oldChar="\\" newChar="/"/>
diff --git a/checkstyle/xdocs/changes.xml b/checkstyle/xdocs/changes.xml
index ee73d656..20ae674e 100644
--- a/checkstyle/xdocs/changes.xml
+++ b/checkstyle/xdocs/changes.xml
@@ -25,6 +25,7 @@
   </properties>
   <body>
     <release version="3.0.1-SNAPSHOT" date="in SVN">
+      <action dev="ltheussl" type="fix" issue="MPCHECKSTYLE-52">The links to source xref files does not honor <code>maven.jxr.destdir</code> and <code>maven.jxr.destdir.test</code>.</action>
       <action dev="ltheussl" type="fix" issue="MPCHECKSTYLE-38">RSS file has incorrect links when used in multiproject build.</action>
       <action dev="ltheussl" type="fix" issue="MPCHECKSTYLE-9"><code>maven.checkstyle.header.file</code> now defaults to <code>${maven.license.licenseFile}</code>.</action>
       <action dev="ltheussl" type="fix" issue="MPCHECKSTYLE-53" due-to="Bernard Durfee">ClassCastException when moving from 2.5 to 3.0. Xalan is used for ant's style task.</action>